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| | Issue Date | Title | Author(s) | Journal |
| 1 | Jul-2018 | Optimal bioprocess design through a gene regulatory network – growth kinetic hybrid model: towards replacing Monod kinetics | Tsipa, Argyro ; Koutinas, Michalis ; Usaku, Chonlatep ; Mantalaris, Athanasios A. | Metabolic engineering |
| 2 | 2017 | The impact of succinate trace on pWW0 and ortho-cleavage pathway transcription in Pseudomonas putida mt-2 during toluene biodegradation | Tsipa, Argyro ; Koutinas, Michalis ; Vernardis, Spyros I. ; Mantalaris, Athanasios A. | Bioresource Technology |
| 3 | 20-Jun-2016 | Transcriptional kinetics of the cross-talk between the ortho-cleavage and TOL pathways of toluene biodegradation in Pseudomonas putida mt-2 | Tsipa, Argyro ; Koutinas, Michalis ; Pistikopoulos, Efstratios N. ; Mantalaris, Athanasios A. | Journal of Biotechnology |
| 4 | Oct-2012 | Bioprocess Systems Engineering: Transferring Traditional Process Engineering Principles to Industrial Biotechnology | Koutinas, Michalis ; Kiparissides, Alexandros ; Pistikopoulos, Efstratios N. ; Mantalaris, Athanasios A. | Computational and Structural Biotechnology Journal |
| 5 | 15-Jul-2011 | Improving the prediction of Pseudomonas putida mt-2 growth kinetics with the use of a gene expression regulation model of the TOL plasmid | Koutinas, Michalis ; Kiparissides, Alexandros ; Lam, Ming Chi ; Silva-Rocha, Rafael ; Godinho, Miguel ; de Lorenzo, Victor ; Martins dos Santos, Vitor A.P. ; Pistikopoulos, Efstratios N. ; Mantalaris, Athanasios A. | Biochemical Engineering Journal |
| 6 | Jul-2011 | Linking genes to microbial growth kinetics: an integrated biochemical systems engineering approach | Koutinas, Michalis ; Kiparissides, Alexandros ; Silva-Rocha, Rafael ; Lam, Ming Chi ; Martins dos Santos, Vitor A.P. ; de Lorenzo, Victor ; Pistikopoulos, Efstratios N. ; Mantalaris, Athanasios A. | Metabolic engineering |
| 7 | Jun-2011 | 'Closing the loop' in biological systems modeling-from the in silico to the in vitro | Kiparissides, Alexandros ; Koutinas, Michalis ; Kontoravdi, Cleo ; Mantalaris, Athanasios A. ; Pistikopoulos, Efstratios N. | Automatica |
| 8 | 8-Feb-2011 | Modelling the Delta1/Notch1 pathway: in search of the mediator(s) of neural stem cell differentiation | Kiparissides, Alexandros ; Koutinas, Michalis ; Moss, Toby ; Newman, John ; Pistikopoulos, Efstratios N. ; Mantalaris, Athanasios A. | PLoS ONE |
| 9 | Jun-2010 | The regulatory logic of m-xylene biodegradation by Pseudomonas putida mt-2 exposed by dynamic modelling of the principal node Ps/Pr of the TOL plasmid | Koutinas, Michalis ; Lam, Ming Chi ; Kiparissides, Alexandros ; Silva-Rocha, Rafael ; Godinho, Miguel ; Livingston, Andrew G ; Pistikopoulos, Efstratios N. ; de Lorenzo, Victor ; Dos Santos, Vitor A P Martins ; Mantalaris, Athanasios A. | Environmental Microbiology |
| 10 | 2010 | Combining genetic circuit and microbial growth kinetic models: A challenge for biological modelling | Koutinas, Michalis ; Kiparissides, Alexandros ; Lam, Ming Chi ; Silva-Rocha, Rafael ; de Lorenzo, Victor ; Dos Santos, Vitor A P Martins ; Pistikopoulos, Efstratios N. ; Mantalaris, Athanasios A. | Computer Aided Chemical Engineering |
